Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015838185.1_cds_XP_016506921.1_20099
CDS Infomation

[gene=LOC107824634] [db_xref=GeneID:107824634] [protein=protein SAP1-like] [protein_id=XP_016506921.1] [location=join(34..171,260..295,479..572,1199..1241,1329..1429,1866..1930,2054..2547,2642..2729,2818..2937,3277..3845,4471..4606,4693..4761,4874..5005,5620..5733)] [gbkey=CDS]
Sequence

ATGTTATCTGCATTTAGCGCTTTAACTATGTTTGATACTTATAATGCAGAACTTTACCAG
CAAACTCTAGCGAAGGCTTTGGCGCATCATTTTGATGCTAAACTGCTGCTTTTGGATCTA
ACTGACTTCACTCTAAAGATGCAGAGCAAGTATGGCATCTTTAAGAAAGAATCGGCTTTC
AAGAGGTCAACCTCAGAGTCTATGTTGGGACGTTGGTCCAGTTTGATTGGTTCATTCTCA
ATTCTTCCAGCAAGAGAGAATAATGGAGGTACCTTTTCAAGGCAAACCACTGCGTTTGAT
GCTAAATCAAGGAATAGGGAAGGTGCAAGCAACTCTATAAAGCATCGCAGGACCGCTTCT
GTTTCTTCTGATATAAGTAGCATCAGCTCTGACTCCTGTTCTTCAAATCCAGCTCCAACT
AAGAGGGTGAACAGCTGGTCAATAGATGAAAAGGCTTTCTTACAGTCACTTTACAAGGTT
TTGGTGTCGGTCTCTGAAAACAACCGTGTTATTCTCTACATCAGGGATGTTGACAGACAT
CTTCAACCACCCAGAGTTTATAAACTCTTTGATCGAATGCTGAAGAAGCTGTCAGGATCG
GTGTTGGTTCTAGGCTCCAGGATGTTTGAGCATGAAGATGATTGTGAGGAAGTAGATGAG
AAACTCGGTCTTCTGTTTCCTTACAATATTGAAATTAGGCCCCCTGAAGATGAGACACAT
CTTACAGACTGGAAAACACAACTCGATAAGGATATGAAGATGATTCAGTTTCAGGACAAC
AAGAATCACATTGCAGAGGTGCTTGCAGCAAATGACCTCGAATGTGATGATCTAGGATCT
ATCTGTCAAGCTGACACAGTGGTGCTGAGTAATTACATAGAGGAAATTGTTATCTCTGCT
ATATCATATCATTTGATGAACAGCAAGGATCCAGAATATCGAAATGGGAAGCTCCTCATA
TCATCCAACAGTTTGTCCCATGGATTAAATGTCTTCCAGGACGGAAAGAGTGGTTGCAGA
GACTCCCTCAAAATGGAGGCAAATGCTGAAACGTCCAAGGATACTGGGGATATTGGGTTA
AAGCCTGAAACAAAGTCTGGGAACCCAACATCTGAGAGTAAGGGCGAGGCTGAAAAATCA
GTTCCTTCAGCAAAAAAGGATGGAGAGATTAAGGCCCCGGAAGTTCTTCCTGACAATGAA
TTCGAGAAGCGGATAAGACCAGAGGTTATACCTTCAAATGAGATTGGAGTGACATTTGCG
GATATTGGTGCTCTAGATGAAACTAAAGAATCACTTCAGGAGCTGGTCATGCTTCCTCTT
AGAAGACCTGACCTCTTCAACGGTGGACTGCTGAAGCCTTGCAGAGGTATACTACTCTTT
GGTCCACCTGGCACTGGGAAAACGATGCTGGCCAAAGCAATAGCCAACGAAGCTGGAGCG
AGCTTTATAAATGTCTCAATGTCAACCATTACTTCAAAATGGTTTGGGGAAGATGAAAAG
AATGTCAGAGCTCTTTTCACACTTGCAGCGAAGGTTTCTCCTACGATCATTTTTGTGGAT
GAGGTTGATAGCATGCTCGGGCAGCGGACAAGAGTTGGAGAGCACGAGGCTATGCGAAAA
ATTAAGAATGAGTTTATGACTCACTGGGACGGATTATTGACTAAACCAGGTGAGCGTATC
CTTGTTCTTGCTGCAACCAACAGACCTTTCGACCTCGATGAAGCAATAATCAGGCGGTTT
GAGCGCAGAATTATGGTCGGTTTACCTGCAGCTGAGAATAGAGAGAAGATTTTGAGAACT
CTTCTAGCAAAGGAGAAGGTAGAAGATCTTGATTTTAAAGAGCTCGCAGCCATGACCGAA
GGATATAGTGGAAGTGATCTTAAGAACTTGTGCACAACAGCAGCTTATCGGCCTGTCAGA
GAGCTAATACAACAAGAGAGAAAGAAAGATATGGAAAAGAAGCGGAGAGCTGATGAAGGG
CAGAGTGCAGAAGATCACTCAGATGAGAAAGAAGAAGCCACAGAAGAAAGAGTAATTGCT
TTGAGGCCTCTAAACATGGAAGACATGAGACAGGCAAAGAATCAGGTTGCTGCTAGCTTT
GCTTCTGAGGGATCCGTAATGAGTGAGCTGAAGCAGTGGAATGACCTTTATGGAGAAGGA
GGTTCTAGAAAGAAGCAGCAGTTATCTTATTTCCTTTAG

Peptide Sequence

PEP ID

XP_016506921.1
PEP Infomation

PREDICTED: protein SAP1-like [Nicotiana tabacum]
Sequence

MLSAFSALTMFDTYNAELYQQTLAKALAHHFDAKLLLLDLTDFTLKMQSKYGIFKKESAF
KRSTSESMLGRWSSLIGSFSILPARENNGGTFSRQTTAFDAKSRNREGASNSIKHRRTAS
VSSDISSISSDSCSSNPAPTKRVNSWSIDEKAFLQSLYKVLVSVSENNRVILYIRDVDRH
LQPPRVYKLFDRMLKKLSGSVLVLGSRMFEHEDDCEEVDEKLGLLFPYNIEIRPPEDETH
LTDWKTQLDKDMKMIQFQDNKNHIAEVLAANDLECDDLGSICQADTVVLSNYIEEIVISA
ISYHLMNSKDPEYRNGKLLISSNSLSHGLNVFQDGKSGCRDSLKMEANAETSKDTGDIGL
KPETKSGNPTSESKGEAEKSVPSAKKDGEIKAPEVLPDNEFEKRIRPEVIPSNEIGVTFA
DIGALDETKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGA
SFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRK
IKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPAAENREKILRT
LLAKEKVEDLDFKELAAMTEGYSGSDLKNLCTTAAYRPVRELIQQERKKDMEKKRRADEG
QSAEDHSDEKEEATEERVIALRPLNMEDMRQAKNQVAASFASEGSVMSELKQWNDLYGEG
GSRKKQQLSYFL

Transcript Sequence

Gene sequence data has not been registered.